Details for DataSet_571

Sample info of the DataSet

Sample_accession Sample_group Organism Target_gene Data_type sgRNA sgRNA_Number_perVector sgRNA_coordinate PubMed Data_source Cell_type Sample_Type Notes
GSM7114357caseHomo sapienschr17-45949229RNA_seqCTTTCCCCAGACCAGAACCG,GCAGCCTGAGACACCCGCCG,CGGGCTGGTCTCCTACACCG,GGAGCTGACGTTCATTACCC4chr17:45949415:-,chr17:45949144:+,chr17:45949262:+,chr17:45949348:-38232730GSE228121XCL4cell line
GSM7114401caseHomo sapienschr17-45949229RNA_seqCTTTCCCCAGACCAGAACCG,GCAGCCTGAGACACCCGCCG,CGGGCTGGTCTCCTACACCG,GGAGCTGACGTTCATTACCC4chr17:45949415:-,chr17:45949144:+,chr17:45949262:+,chr17:45949348:-38232730GSE228121XCL4cell line
GSM7114443caseHomo sapienschr17-45949229RNA_seqCTTTCCCCAGACCAGAACCG,GCAGCCTGAGACACCCGCCG,CGGGCTGGTCTCCTACACCG,GGAGCTGACGTTCATTACCC4chr17:45949415:-,chr17:45949144:+,chr17:45949262:+,chr17:45949348:-38232730GSE228121XCL4cell line
GSM7114631caseHomo sapienschr17-45949229RNA_seqCTTTCCCCAGACCAGAACCG,GCAGCCTGAGACACCCGCCG,CGGGCTGGTCTCCTACACCG,GGAGCTGACGTTCATTACCC4chr17:45949415:-,chr17:45949144:+,chr17:45949262:+,chr17:45949348:-38232730GSE228121XCL4cell line
GSM7114331controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121XCL4cell line
GSM7114360controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121XCL4cell line

Gene expression profile

       

Scatter diagram of differential expression

Heatmap of unsupervised hierarchical clustering

Heatmap image


Function Enrichment Analysis of differentially expressed genes & Gene Set Enrichment Analysis (GSEA) of all expressed genes