Details for DataSet_572

Sample info of the DataSet

Sample_accession Sample_group Organism Target_gene Data_type sgRNA sgRNA_Number_perVector sgRNA_coordinate PubMed Data_source Cell_type Sample_Type Notes
GSM7114358caseHomo sapienschr17-45309544RNA_seqATGGCTCCTGACCAGCACCG,CAGGGGTAAGCTGGGCACGA,CAATTGAGGCACCGCCCTGG,TGCCAGGTGATTGGACAGTG4chr17:45309632:-,chr17:45309390:+,chr17:45309435:-,chr17:45309470:-38232730GSE228121XCL4cell line
GSM7114393caseHomo sapienschr17-45309544RNA_seqATGGCTCCTGACCAGCACCG,CAGGGGTAAGCTGGGCACGA,CAATTGAGGCACCGCCCTGG,TGCCAGGTGATTGGACAGTG4chr17:45309632:-,chr17:45309390:+,chr17:45309435:-,chr17:45309470:-38232730GSE228121XCL4cell line
GSM7114394caseHomo sapienschr17-45309544RNA_seqATGGCTCCTGACCAGCACCG,CAGGGGTAAGCTGGGCACGA,CAATTGAGGCACCGCCCTGG,TGCCAGGTGATTGGACAGTG4chr17:45309632:-,chr17:45309390:+,chr17:45309435:-,chr17:45309470:-38232730GSE228121XCL4cell line
GSM7114435caseHomo sapienschr17-45309544RNA_seqATGGCTCCTGACCAGCACCG,CAGGGGTAAGCTGGGCACGA,CAATTGAGGCACCGCCCTGG,TGCCAGGTGATTGGACAGTG4chr17:45309632:-,chr17:45309390:+,chr17:45309435:-,chr17:45309470:-38232730GSE228121XCL4cell line
GSM7114436caseHomo sapienschr17-45309544RNA_seqATGGCTCCTGACCAGCACCG,CAGGGGTAAGCTGGGCACGA,CAATTGAGGCACCGCCCTGG,TGCCAGGTGATTGGACAGTG4chr17:45309632:-,chr17:45309390:+,chr17:45309435:-,chr17:45309470:-38232730GSE228121XCL4cell line
GSM7114624caseHomo sapienschr17-45309544RNA_seqATGGCTCCTGACCAGCACCG,CAGGGGTAAGCTGGGCACGA,CAATTGAGGCACCGCCCTGG,TGCCAGGTGATTGGACAGTG4chr17:45309632:-,chr17:45309390:+,chr17:45309435:-,chr17:45309470:-38232730GSE228121XCL4cell line
GSM7114625caseHomo sapienschr17-45309544RNA_seqATGGCTCCTGACCAGCACCG,CAGGGGTAAGCTGGGCACGA,CAATTGAGGCACCGCCCTGG,TGCCAGGTGATTGGACAGTG4chr17:45309632:-,chr17:45309390:+,chr17:45309435:-,chr17:45309470:-38232730GSE228121XCL4cell line
GSM7114331controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121XCL4cell line
GSM7114360controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121XCL4cell line

Gene expression profile

       

Scatter diagram of differential expression

Heatmap of unsupervised hierarchical clustering

Heatmap image


Function Enrichment Analysis of differentially expressed genes & Gene Set Enrichment Analysis (GSEA) of all expressed genes