Details for DataSet_575

Sample info of the DataSet

Sample_accession Sample_group Organism Target_gene Data_type sgRNA sgRNA_Number_perVector sgRNA_coordinate PubMed Data_source Cell_type Sample_Type Notes
GSM7114371caseHomo sapienschr17-46004145RNA_seqATCAGCTTAGGAACTGACAC,TCTGCTGGGAGTTTAACCCG,CAGCCTGGGAGCCAACTGTG,CCAACTGTGAGGCACGGACg4chr17:46004179:+,chr17:46003994:-,chr17:46004062:-,chr17:46004168:+38232730GSE228121XCL4cell line
GSM7114403caseHomo sapienschr17-46004145RNA_seqATCAGCTTAGGAACTGACAC,TCTGCTGGGAGTTTAACCCG,CAGCCTGGGAGCCAACTGTG,CCAACTGTGAGGCACGGACg4chr17:46004179:+,chr17:46003994:-,chr17:46004062:-,chr17:46004168:+38232730GSE228121XCL4cell line
GSM7114405caseHomo sapienschr17-46004145RNA_seqATCAGCTTAGGAACTGACAC,TCTGCTGGGAGTTTAACCCG,CAGCCTGGGAGCCAACTGTG,CCAACTGTGAGGCACGGACg4chr17:46004179:+,chr17:46003994:-,chr17:46004062:-,chr17:46004168:+38232730GSE228121XCL4cell line
GSM7114410caseHomo sapienschr17-46004145RNA_seqATCAGCTTAGGAACTGACAC,TCTGCTGGGAGTTTAACCCG,CAGCCTGGGAGCCAACTGTG,CCAACTGTGAGGCACGGACg4chr17:46004179:+,chr17:46003994:-,chr17:46004062:-,chr17:46004168:+38232730GSE228121XCL4cell line
GSM7114445caseHomo sapienschr17-46004145RNA_seqATCAGCTTAGGAACTGACAC,TCTGCTGGGAGTTTAACCCG,CAGCCTGGGAGCCAACTGTG,CCAACTGTGAGGCACGGACg4chr17:46004179:+,chr17:46003994:-,chr17:46004062:-,chr17:46004168:+38232730GSE228121XCL4cell line
GSM7114447caseHomo sapienschr17-46004145RNA_seqATCAGCTTAGGAACTGACAC,TCTGCTGGGAGTTTAACCCG,CAGCCTGGGAGCCAACTGTG,CCAACTGTGAGGCACGGACg4chr17:46004179:+,chr17:46003994:-,chr17:46004062:-,chr17:46004168:+38232730GSE228121XCL4cell line
GSM7114331controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121XCL4cell line
GSM7114360controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121XCL4cell line

Gene expression profile

       

Scatter diagram of differential expression

Heatmap of unsupervised hierarchical clustering

Heatmap image


Function Enrichment Analysis of differentially expressed genes & Gene Set Enrichment Analysis (GSEA) of all expressed genes