Details for DataSet_576

Sample info of the DataSet

Sample_accession Sample_group Organism Target_gene Data_type sgRNA sgRNA_Number_perVector sgRNA_coordinate PubMed Data_source Cell_type Sample_Type Notes
GSM7114373caseHomo sapienschr17-46291354RNA_seqgtgagcaggactaaaactgc,taacagtaagagtttctcgg,TCaacccttaacttccagca3chr17:46291369:+,chr17:46291437:+,chr17:64923048:+38232730GSE228121XCL4cell line
GSM7114406caseHomo sapienschr17-46291354RNA_seqgtgagcaggactaaaactgc,taacagtaagagtttctcgg,TCaacccttaacttccagca3chr17:46291369:+,chr17:46291437:+,chr17:64923048:+38232730GSE228121XCL4cell line
GSM7114411caseHomo sapienschr17-46291354RNA_seqgtgagcaggactaaaactgc,taacagtaagagtttctcgg,TCaacccttaacttccagca3chr17:46291369:+,chr17:46291437:+,chr17:64923048:+38232730GSE228121XCL4cell line
GSM7114448caseHomo sapienschr17-46291354RNA_seqgtgagcaggactaaaactgc,taacagtaagagtttctcgg,TCaacccttaacttccagca3chr17:46291369:+,chr17:46291437:+,chr17:64923048:+38232730GSE228121XCL4cell line
GSM7114610caseHomo sapienschr17-46291354RNA_seqgtgagcaggactaaaactgc,taacagtaagagtttctcgg,TCaacccttaacttccagca3chr17:46291369:+,chr17:46291437:+,chr17:64923048:+38232730GSE228121XCL4cell line
GSM7114632caseHomo sapienschr17-46291354RNA_seqgtgagcaggactaaaactgc,taacagtaagagtttctcgg,TCaacccttaacttccagca3chr17:46291369:+,chr17:46291437:+,chr17:64923048:+38232730GSE228121XCL4cell line
GSM7114331controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121XCL4cell line
GSM7114360controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121XCL4cell line

Gene expression profile

       

Scatter diagram of differential expression

Heatmap of unsupervised hierarchical clustering

Heatmap image


Function Enrichment Analysis of differentially expressed genes & Gene Set Enrichment Analysis (GSEA) of all expressed genes