Details for DataSet_577

Sample info of the DataSet

Sample_accession Sample_group Organism Target_gene Data_type sgRNA sgRNA_Number_perVector sgRNA_coordinate PubMed Data_source Cell_type Sample_Type Notes
GSM7114374caseHomo sapienschr17-45940494RNA_seqgattccccaactcacagatg,atgtgttgaattatcccaag,gcttgaagaggagacgacag,gggatagttgaatctgtgaa4chr17:45940635:+,chr17:45940396:-,chr17:45940449:+,chr17:45940608:+38232730GSE228121XCL4cell line
GSM7114413caseHomo sapienschr17-45940494RNA_seqgattccccaactcacagatg,atgtgttgaattatcccaag,gcttgaagaggagacgacag,gggatagttgaatctgtgaa4chr17:45940635:+,chr17:45940396:-,chr17:45940449:+,chr17:45940608:+38232730GSE228121XCL4cell line
GSM7114414caseHomo sapienschr17-45940494RNA_seqgattccccaactcacagatg,atgtgttgaattatcccaag,gcttgaagaggagacgacag,gggatagttgaatctgtgaa4chr17:45940635:+,chr17:45940396:-,chr17:45940449:+,chr17:45940608:+38232730GSE228121XCL4cell line
GSM7114611caseHomo sapienschr17-45940494RNA_seqgattccccaactcacagatg,atgtgttgaattatcccaag,gcttgaagaggagacgacag,gggatagttgaatctgtgaa4chr17:45940635:+,chr17:45940396:-,chr17:45940449:+,chr17:45940608:+38232730GSE228121XCL4cell line
GSM7114635caseHomo sapienschr17-45940494RNA_seqgattccccaactcacagatg,atgtgttgaattatcccaag,gcttgaagaggagacgacag,gggatagttgaatctgtgaa4chr17:45940635:+,chr17:45940396:-,chr17:45940449:+,chr17:45940608:+38232730GSE228121XCL4cell line
GSM7114331controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121XCL4cell line
GSM7114360controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121XCL4cell line

Gene expression profile

       

Scatter diagram of differential expression

Heatmap of unsupervised hierarchical clustering

Heatmap image


Function Enrichment Analysis of differentially expressed genes & Gene Set Enrichment Analysis (GSEA) of all expressed genes