Details for DataSet_579

Sample info of the DataSet

Sample_accession Sample_group Organism Target_gene Data_type sgRNA sgRNA_Number_perVector sgRNA_coordinate PubMed Data_source Cell_type Sample_Type Notes
GSM7114377caseHomo sapienschr17-45870936RNA_seqACGTGAATGTTAAGGAGCAG,GAAAAGTGTTCAGTTAGTgg,TGTGGAGCATAGCATAGCCT,aacagccctggatgcacagt4chr17:45871145:-,chr17:45870732:-,chr17:45870991:-,chr17:45871036:-38232730GSE228121XCL4cell line
GSM7114420caseHomo sapienschr17-45870936RNA_seqACGTGAATGTTAAGGAGCAG,GAAAAGTGTTCAGTTAGTgg,TGTGGAGCATAGCATAGCCT,aacagccctggatgcacagt4chr17:45871145:-,chr17:45870732:-,chr17:45870991:-,chr17:45871036:-38232730GSE228121XCL4cell line
GSM7114421caseHomo sapienschr17-45870936RNA_seqACGTGAATGTTAAGGAGCAG,GAAAAGTGTTCAGTTAGTgg,TGTGGAGCATAGCATAGCCT,aacagccctggatgcacagt4chr17:45871145:-,chr17:45870732:-,chr17:45870991:-,chr17:45871036:-38232730GSE228121XCL4cell line
GSM7114613caseHomo sapienschr17-45870936RNA_seqACGTGAATGTTAAGGAGCAG,GAAAAGTGTTCAGTTAGTgg,TGTGGAGCATAGCATAGCCT,aacagccctggatgcacagt4chr17:45871145:-,chr17:45870732:-,chr17:45870991:-,chr17:45871036:-38232730GSE228121XCL4cell line
GSM7114638caseHomo sapienschr17-45870936RNA_seqACGTGAATGTTAAGGAGCAG,GAAAAGTGTTCAGTTAGTgg,TGTGGAGCATAGCATAGCCT,aacagccctggatgcacagt4chr17:45871145:-,chr17:45870732:-,chr17:45870991:-,chr17:45871036:-38232730GSE228121XCL4cell line
GSM7114331controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121XCL4cell line
GSM7114360controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121XCL4cell line

Gene expression profile

       

Scatter diagram of differential expression

Heatmap of unsupervised hierarchical clustering

Heatmap image


Function Enrichment Analysis of differentially expressed genes & Gene Set Enrichment Analysis (GSEA) of all expressed genes