Details for DataSet_581

Sample info of the DataSet

Sample_accession Sample_group Organism Target_gene Data_type sgRNA sgRNA_Number_perVector sgRNA_coordinate PubMed Data_source Cell_type Sample_Type Notes
GSM7114380caseHomo sapienschr17-45870177RNA_seqGCACCAAAATAGTGCCTGCG,taaaatgagaggattgaaca,CCCACGCACAGAGTGGAGTG,GTGATGGCTCTTTAGAAGGG4chr17:45870349:-,chr17:45869953:-,chr17:45870062:+,chr17:45870175:+38232730GSE228121XCL4cell line
GSM7114424caseHomo sapienschr17-45870177RNA_seqGCACCAAAATAGTGCCTGCG,taaaatgagaggattgaaca,CCCACGCACAGAGTGGAGTG,GTGATGGCTCTTTAGAAGGG4chr17:45870349:-,chr17:45869953:-,chr17:45870062:+,chr17:45870175:+38232730GSE228121XCL4cell line
GSM7114425caseHomo sapienschr17-45870177RNA_seqGCACCAAAATAGTGCCTGCG,taaaatgagaggattgaaca,CCCACGCACAGAGTGGAGTG,GTGATGGCTCTTTAGAAGGG4chr17:45870349:-,chr17:45869953:-,chr17:45870062:+,chr17:45870175:+38232730GSE228121XCL4cell line
GSM7114615caseHomo sapienschr17-45870177RNA_seqGCACCAAAATAGTGCCTGCG,taaaatgagaggattgaaca,CCCACGCACAGAGTGGAGTG,GTGATGGCTCTTTAGAAGGG4chr17:45870349:-,chr17:45869953:-,chr17:45870062:+,chr17:45870175:+38232730GSE228121XCL4cell line
GSM7114640caseHomo sapienschr17-45870177RNA_seqGCACCAAAATAGTGCCTGCG,taaaatgagaggattgaaca,CCCACGCACAGAGTGGAGTG,GTGATGGCTCTTTAGAAGGG4chr17:45870349:-,chr17:45869953:-,chr17:45870062:+,chr17:45870175:+38232730GSE228121XCL4cell line
GSM7114331controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121XCL4cell line
GSM7114360controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121XCL4cell line

Gene expression profile

       

Scatter diagram of differential expression

Heatmap of unsupervised hierarchical clustering

Heatmap image


Function Enrichment Analysis of differentially expressed genes & Gene Set Enrichment Analysis (GSEA) of all expressed genes