Details for DataSet_582

Sample info of the DataSet

Sample_accession Sample_group Organism Target_gene Data_type sgRNA sgRNA_Number_perVector sgRNA_coordinate PubMed Data_source Cell_type Sample_Type Notes
GSM7114381caseHomo sapienschr17-45956825RNA_seqatgggtgcagcacaccaaca,aaggggaacatcacacactg,cacagcatgttctcactcgt,aatgtggcacatatacacca4chr19:30815230:+,chr13:103400115:-,chr12:59478844:-,chr4:111169943:+38232730GSE228121XCL4cell line
GSM7114427caseHomo sapienschr17-45956825RNA_seqatgggtgcagcacaccaaca,aaggggaacatcacacactg,cacagcatgttctcactcgt,aatgtggcacatatacacca4chr19:30815230:+,chr13:103400115:-,chr12:59478844:-,chr4:111169943:+38232730GSE228121XCL4cell line
GSM7114428caseHomo sapienschr17-45956825RNA_seqatgggtgcagcacaccaaca,aaggggaacatcacacactg,cacagcatgttctcactcgt,aatgtggcacatatacacca4chr19:30815230:+,chr13:103400115:-,chr12:59478844:-,chr4:111169943:+38232730GSE228121XCL4cell line
GSM7114616caseHomo sapienschr17-45956825RNA_seqatgggtgcagcacaccaaca,aaggggaacatcacacactg,cacagcatgttctcactcgt,aatgtggcacatatacacca4chr19:30815230:+,chr13:103400115:-,chr12:59478844:-,chr4:111169943:+38232730GSE228121XCL4cell line
GSM7114641caseHomo sapienschr17-45956825RNA_seqatgggtgcagcacaccaaca,aaggggaacatcacacactg,cacagcatgttctcactcgt,aatgtggcacatatacacca4chr19:30815230:+,chr13:103400115:-,chr12:59478844:-,chr4:111169943:+38232730GSE228121XCL4cell line
GSM7114331controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121XCL4cell line
GSM7114360controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121XCL4cell line

Gene expression profile

       

Scatter diagram of differential expression

Heatmap of unsupervised hierarchical clustering

Heatmap image


Function Enrichment Analysis of differentially expressed genes & Gene Set Enrichment Analysis (GSEA) of all expressed genes