Details for DataSet_583

Sample info of the DataSet

Sample_accession Sample_group Organism Target_gene Data_type sgRNA sgRNA_Number_perVector sgRNA_coordinate PubMed Data_source Cell_type Sample_Type Notes
GSM7114383caseHomo sapienschr17-45223036RNA_seqGAAGTTCGAAAATCGCCGAG,AATTCCCCAGGTAGGCACAG,gcgtgctaaacagaagattg,CTCCTCTTAGACACTGACCG4chr17:45224418:-,chr17:45221800:+,chr17:45222923:-,chr17:45223825:-38232730GSE228121XCL4cell line
GSM7114429caseHomo sapienschr17-45223036RNA_seqGAAGTTCGAAAATCGCCGAG,AATTCCCCAGGTAGGCACAG,gcgtgctaaacagaagattg,CTCCTCTTAGACACTGACCG4chr17:45224418:-,chr17:45221800:+,chr17:45222923:-,chr17:45223825:-38232730GSE228121XCL4cell line
GSM7114461caseHomo sapienschr17-45223036RNA_seqGAAGTTCGAAAATCGCCGAG,AATTCCCCAGGTAGGCACAG,gcgtgctaaacagaagattg,CTCCTCTTAGACACTGACCG4chr17:45224418:-,chr17:45221800:+,chr17:45222923:-,chr17:45223825:-38232730GSE228121XCL4cell line
GSM7114617caseHomo sapienschr17-45223036RNA_seqGAAGTTCGAAAATCGCCGAG,AATTCCCCAGGTAGGCACAG,gcgtgctaaacagaagattg,CTCCTCTTAGACACTGACCG4chr17:45224418:-,chr17:45221800:+,chr17:45222923:-,chr17:45223825:-38232730GSE228121XCL4cell line
GSM7114642caseHomo sapienschr17-45223036RNA_seqGAAGTTCGAAAATCGCCGAG,AATTCCCCAGGTAGGCACAG,gcgtgctaaacagaagattg,CTCCTCTTAGACACTGACCG4chr17:45224418:-,chr17:45221800:+,chr17:45222923:-,chr17:45223825:-38232730GSE228121XCL4cell line
GSM7114331controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121XCL4cell line
GSM7114360controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121XCL4cell line

Gene expression profile

       

Scatter diagram of differential expression

Heatmap of unsupervised hierarchical clustering

Heatmap image


Function Enrichment Analysis of differentially expressed genes & Gene Set Enrichment Analysis (GSEA) of all expressed genes