Details for DataSet_585

Sample info of the DataSet

Sample_accession Sample_group Organism Target_gene Data_type sgRNA sgRNA_Number_perVector sgRNA_coordinate PubMed Data_source Cell_type Sample_Type Notes
GSM7114385caseHomo sapienschr17-46026698RNA_seqTCTCATGGCAGTCCCAAAGG,TACAGTTAAAGGCAACCCTG,GGACTCAGCGAACGGCAGGG,ACTGTTGGCAGTAATGAGGG4chr17:46027117:-,chr17:46026454:+,chr17:46026885:+,chr17:46027017:-38232730GSE228121XCL4cell line
GSM7114468caseHomo sapienschr17-46026698RNA_seqTCTCATGGCAGTCCCAAAGG,TACAGTTAAAGGCAACCCTG,GGACTCAGCGAACGGCAGGG,ACTGTTGGCAGTAATGAGGG4chr17:46027117:-,chr17:46026454:+,chr17:46026885:+,chr17:46027017:-38232730GSE228121XCL4cell line
GSM7114469caseHomo sapienschr17-46026698RNA_seqTCTCATGGCAGTCCCAAAGG,TACAGTTAAAGGCAACCCTG,GGACTCAGCGAACGGCAGGG,ACTGTTGGCAGTAATGAGGG4chr17:46027117:-,chr17:46026454:+,chr17:46026885:+,chr17:46027017:-38232730GSE228121XCL4cell line
GSM7114572caseHomo sapienschr17-46026698RNA_seqTCTCATGGCAGTCCCAAAGG,TACAGTTAAAGGCAACCCTG,GGACTCAGCGAACGGCAGGG,ACTGTTGGCAGTAATGAGGG4chr17:46027117:-,chr17:46026454:+,chr17:46026885:+,chr17:46027017:-38232730GSE228121XCL4cell line
GSM7114619caseHomo sapienschr17-46026698RNA_seqTCTCATGGCAGTCCCAAAGG,TACAGTTAAAGGCAACCCTG,GGACTCAGCGAACGGCAGGG,ACTGTTGGCAGTAATGAGGG4chr17:46027117:-,chr17:46026454:+,chr17:46026885:+,chr17:46027017:-38232730GSE228121XCL4cell line
GSM7114331controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121XCL4cell line
GSM7114360controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121XCL4cell line

Gene expression profile

       

Scatter diagram of differential expression

Heatmap of unsupervised hierarchical clustering

Heatmap image


Function Enrichment Analysis of differentially expressed genes & Gene Set Enrichment Analysis (GSEA) of all expressed genes