Details for DataSet_586

Sample info of the DataSet

Sample_accession Sample_group Organism Target_gene Data_type sgRNA sgRNA_Number_perVector sgRNA_coordinate PubMed Data_source Cell_type Sample_Type Notes
GSM7114386caseHomo sapienschr17-46193355RNA_seqGAAGCCGACTCGTCTCGCCG,GCCGAGGTGAGTCTAACCTG,GCTCACGTCCTCTCGCTCCG,AGCCGTGCTGCAGTATACGG4chr17:46193990:-,chr17:46193289:-,chr17:46193733:+,chr17:46193835:-38232730GSE228121XCL4cell line
GSM7114470caseHomo sapienschr17-46193355RNA_seqGAAGCCGACTCGTCTCGCCG,GCCGAGGTGAGTCTAACCTG,GCTCACGTCCTCTCGCTCCG,AGCCGTGCTGCAGTATACGG4chr17:46193990:-,chr17:46193289:-,chr17:46193733:+,chr17:46193835:-38232730GSE228121XCL4cell line
GSM7114471caseHomo sapienschr17-46193355RNA_seqGAAGCCGACTCGTCTCGCCG,GCCGAGGTGAGTCTAACCTG,GCTCACGTCCTCTCGCTCCG,AGCCGTGCTGCAGTATACGG4chr17:46193990:-,chr17:46193289:-,chr17:46193733:+,chr17:46193835:-38232730GSE228121XCL4cell line
GSM7114620caseHomo sapienschr17-46193355RNA_seqGAAGCCGACTCGTCTCGCCG,GCCGAGGTGAGTCTAACCTG,GCTCACGTCCTCTCGCTCCG,AGCCGTGCTGCAGTATACGG4chr17:46193990:-,chr17:46193289:-,chr17:46193733:+,chr17:46193835:-38232730GSE228121XCL4cell line
GSM7114331controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121XCL4cell line
GSM7114360controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121XCL4cell line

Gene expression profile

       

Scatter diagram of differential expression

Heatmap of unsupervised hierarchical clustering

Heatmap image


Function Enrichment Analysis of differentially expressed genes & Gene Set Enrichment Analysis (GSEA) of all expressed genes