Details for DataSet_590

Sample info of the DataSet

Sample_accession Sample_group Organism Target_gene Data_type sgRNA sgRNA_Number_perVector sgRNA_coordinate PubMed Data_source Cell_type Sample_Type Notes
GSM7114451caseHomo sapienschr17-45429323RNA_seqcttcggaatacagaacagct,ggttatataacctcccagca,cttcggaatacagaacagct,cacatcagttcaagcgcaat4chr17:45429348:+,chr17:68199999:-,chr17:45429230:+,chr17:68199999:-38232730GSE228121XCL4cell line
GSM7114452caseHomo sapienschr17-45429323RNA_seqcttcggaatacagaacagct,ggttatataacctcccagca,cttcggaatacagaacagct,cacatcagttcaagcgcaat4chr17:45429348:+,chr17:68199999:-,chr17:45429230:+,chr17:68199999:-38232730GSE228121XCL4cell line
GSM7114643caseHomo sapienschr17-45429323RNA_seqcttcggaatacagaacagct,ggttatataacctcccagca,cttcggaatacagaacagct,cacatcagttcaagcgcaat4chr17:45429348:+,chr17:68199999:-,chr17:45429230:+,chr17:68199999:-38232730GSE228121XCL4cell line
GSM7114644caseHomo sapienschr17-45429323RNA_seqcttcggaatacagaacagct,ggttatataacctcccagca,cttcggaatacagaacagct,cacatcagttcaagcgcaat4chr17:45429348:+,chr17:68199999:-,chr17:45429230:+,chr17:68199999:-38232730GSE228121XCL4cell line
GSM7114331controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121XCL4cell line
GSM7114360controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121XCL4cell line

Gene expression profile

       

Scatter diagram of differential expression

Heatmap of unsupervised hierarchical clustering

Heatmap image


Function Enrichment Analysis of differentially expressed genes & Gene Set Enrichment Analysis (GSEA) of all expressed genes