Details for DataSet_591

Sample info of the DataSet

Sample_accession Sample_group Organism Target_gene Data_type sgRNA sgRNA_Number_perVector sgRNA_coordinate PubMed Data_source Cell_type Sample_Type Notes
GSM7114453caseHomo sapienschr17-45432051RNA_seqTGAACCAACAAACCCCAAGC,cccGGGATTTGCTGTCCGGG,TGCGGGCGTTCCTGTTCCCG,ACAGCGCACCAGTCGCCAGG4chr17:45432408:+,chr17:45431552:+,chr17:45432027:+,chr17:45432107:+38232730GSE228121XCL4cell line
GSM7114454caseHomo sapienschr17-45432051RNA_seqTGAACCAACAAACCCCAAGC,cccGGGATTTGCTGTCCGGG,TGCGGGCGTTCCTGTTCCCG,ACAGCGCACCAGTCGCCAGG4chr17:45432408:+,chr17:45431552:+,chr17:45432027:+,chr17:45432107:+38232730GSE228121XCL4cell line
GSM7114645caseHomo sapienschr17-45432051RNA_seqTGAACCAACAAACCCCAAGC,cccGGGATTTGCTGTCCGGG,TGCGGGCGTTCCTGTTCCCG,ACAGCGCACCAGTCGCCAGG4chr17:45432408:+,chr17:45431552:+,chr17:45432027:+,chr17:45432107:+38232730GSE228121XCL4cell line
GSM7114646caseHomo sapienschr17-45432051RNA_seqTGAACCAACAAACCCCAAGC,cccGGGATTTGCTGTCCGGG,TGCGGGCGTTCCTGTTCCCG,ACAGCGCACCAGTCGCCAGG4chr17:45432408:+,chr17:45431552:+,chr17:45432027:+,chr17:45432107:+38232730GSE228121XCL4cell line
GSM7114331controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121XCL4cell line
GSM7114360controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121XCL4cell line

Gene expression profile

       

Scatter diagram of differential expression

Heatmap of unsupervised hierarchical clustering

Heatmap image


Function Enrichment Analysis of differentially expressed genes & Gene Set Enrichment Analysis (GSEA) of all expressed genes