Details for DataSet_592

Sample info of the DataSet

Sample_accession Sample_group Organism Target_gene Data_type sgRNA sgRNA_Number_perVector sgRNA_coordinate PubMed Data_source Cell_type Sample_Type Notes
GSM7114455caseHomo sapienschr17-45849095RNA_seqTGTCTCAATCACACGACCAG,ctggagtgttacaggtgctt,TGGTCAGTGTTGACGTGAGA,GCCAGGACTGACCAATGTCG4chr17:45849683:+,chr17:45848554:+,chr17:45848678:+,chr17:45848841:+38232730GSE228121XCL4cell line
GSM7114456caseHomo sapienschr17-45849095RNA_seqTGTCTCAATCACACGACCAG,ctggagtgttacaggtgctt,TGGTCAGTGTTGACGTGAGA,GCCAGGACTGACCAATGTCG4chr17:45849683:+,chr17:45848554:+,chr17:45848678:+,chr17:45848841:+38232730GSE228121XCL4cell line
GSM7114647caseHomo sapienschr17-45849095RNA_seqTGTCTCAATCACACGACCAG,ctggagtgttacaggtgctt,TGGTCAGTGTTGACGTGAGA,GCCAGGACTGACCAATGTCG4chr17:45849683:+,chr17:45848554:+,chr17:45848678:+,chr17:45848841:+38232730GSE228121XCL4cell line
GSM7114648caseHomo sapienschr17-45849095RNA_seqTGTCTCAATCACACGACCAG,ctggagtgttacaggtgctt,TGGTCAGTGTTGACGTGAGA,GCCAGGACTGACCAATGTCG4chr17:45849683:+,chr17:45848554:+,chr17:45848678:+,chr17:45848841:+38232730GSE228121XCL4cell line
GSM7114331controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121XCL4cell line
GSM7114360controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121XCL4cell line

Gene expression profile

       

Scatter diagram of differential expression

Heatmap of unsupervised hierarchical clustering

Heatmap image


Function Enrichment Analysis of differentially expressed genes & Gene Set Enrichment Analysis (GSEA) of all expressed genes