Details for DataSet_612

Sample info of the DataSet

Sample_accession Sample_group Organism Target_gene Data_type sgRNA sgRNA_Number_perVector sgRNA_coordinate PubMed Data_source Cell_type Sample_Type Notes
GSM7114512caseHomo sapienschr17-46015344RNA_seqgagaatcacttgaacctggg,acggagtttcactgtcaccc,aaaaaTACagctgggcacgg,ctggctaacacggtgaaacc4chr9:72200189:-,chr2:4069105:+,chr21:46506825:+,chr14:50306337:-38232730GSE228121XCL4cell line
GSM7114524caseHomo sapienschr17-46015344RNA_seqgagaatcacttgaacctggg,acggagtttcactgtcaccc,aaaaaTACagctgggcacgg,ctggctaacacggtgaaacc4chr9:72200189:-,chr2:4069105:+,chr21:46506825:+,chr14:50306337:-38232730GSE228121XCL4cell line
GSM7114535caseHomo sapienschr17-46015344RNA_seqgagaatcacttgaacctggg,acggagtttcactgtcaccc,aaaaaTACagctgggcacgg,ctggctaacacggtgaaacc4chr9:72200189:-,chr2:4069105:+,chr21:46506825:+,chr14:50306337:-38232730GSE228121XCL4cell line
GSM7114331controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121XCL4cell line
GSM7114360controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121XCL4cell line

Gene expression profile

       

Scatter diagram of differential expression

Heatmap of unsupervised hierarchical clustering

Heatmap image


Function Enrichment Analysis of differentially expressed genes & Gene Set Enrichment Analysis (GSEA) of all expressed genes