Details for DataSet_653

Sample info of the DataSet

Sample_accession Sample_group Organism Target_gene Data_type sgRNA sgRNA_Number_perVector sgRNA_coordinate PubMed Data_source Cell_type Sample_Type Notes
GSM7518907caseHomo sapiensRAC1RNA_seqGCCCGCGGCCGGAGCCGAGT,GTCCAGAGAAACTCCGGGAg,GGGAAGCGCTCGGGCCCACT,GgccgcTCCCGGAGTTTCTC4chr7:6374405:-,chr7:6374351:+,chr7:6374400:+,chr7:6374368:-38316783GSE236153hGICcell line
GSM7518908caseHomo sapiensRAC1RNA_seqGCCCGCGGCCGGAGCCGAGT,GTCCAGAGAAACTCCGGGAg,GGGAAGCGCTCGGGCCCACT,GgccgcTCCCGGAGTTTCTC4chr7:6374405:-,chr7:6374351:+,chr7:6374400:+,chr7:6374368:-38316783GSE236153hGICcell line
GSM7518909caseHomo sapiensRAC1RNA_seqGCCCGCGGCCGGAGCCGAGT,GTCCAGAGAAACTCCGGGAg,GGGAAGCGCTCGGGCCCACT,GgccgcTCCCGGAGTTTCTC4chr7:6374405:-,chr7:6374351:+,chr7:6374400:+,chr7:6374368:-38316783GSE236153hGICcell line
GSM7518910caseHomo sapiensRAC1RNA_seqGCCCGCGGCCGGAGCCGAGT,GTCCAGAGAAACTCCGGGAg,GGGAAGCGCTCGGGCCCACT,GgccgcTCCCGGAGTTTCTC4chr7:6374405:-,chr7:6374351:+,chr7:6374400:+,chr7:6374368:-38316783GSE236153hGICcell line
GSM7518904controlHomo sapiensNARNA_seqNA0NA38316783GSE236153hGICcell line
GSM7518905controlHomo sapiensNARNA_seqNA0NA38316783GSE236153hGICcell line
GSM7518906controlHomo sapiensNARNA_seqNA0NA38316783GSE236153hGICcell line

Gene expression profile

       

Scatter diagram of differential expression

Heatmap of unsupervised hierarchical clustering

Heatmap image


Function Enrichment Analysis of differentially expressed genes & Gene Set Enrichment Analysis (GSEA) of all expressed genes