Details for DataSet_654

Sample info of the DataSet

Sample_accession Sample_group Organism Target_gene Data_type sgRNA sgRNA_Number_perVector sgRNA_coordinate PubMed Data_source Cell_type Sample_Type Notes
GSM7518911caseHomo sapiensRELARNA_seqGCCAAGTGCGCGCCTCGCCG,GTCGCCGAGGACGAAGAGGC,GAAGAGGCTGGCGTGCCCGG,GTGGCCCCGACCCCCGGCAG4chr11:65663050:-,chr11:65663065:+,chr11:65663078:+,chr11:65663090:+38316783GSE236153hGICcell line
GSM7518912caseHomo sapiensRELARNA_seqGCCAAGTGCGCGCCTCGCCG,GTCGCCGAGGACGAAGAGGC,GAAGAGGCTGGCGTGCCCGG,GTGGCCCCGACCCCCGGCAG4chr11:65663050:-,chr11:65663065:+,chr11:65663078:+,chr11:65663090:+38316783GSE236153hGICcell line
GSM7518913caseHomo sapiensRELARNA_seqGCCAAGTGCGCGCCTCGCCG,GTCGCCGAGGACGAAGAGGC,GAAGAGGCTGGCGTGCCCGG,GTGGCCCCGACCCCCGGCAG4chr11:65663050:-,chr11:65663065:+,chr11:65663078:+,chr11:65663090:+38316783GSE236153hGICcell line
GSM7518914caseHomo sapiensRELARNA_seqGCCAAGTGCGCGCCTCGCCG,GTCGCCGAGGACGAAGAGGC,GAAGAGGCTGGCGTGCCCGG,GTGGCCCCGACCCCCGGCAG4chr11:65663050:-,chr11:65663065:+,chr11:65663078:+,chr11:65663090:+38316783GSE236153hGICcell line
GSM7518904controlHomo sapiensNARNA_seqNA0NA38316783GSE236153hGICcell line
GSM7518905controlHomo sapiensNARNA_seqNA0NA38316783GSE236153hGICcell line
GSM7518906controlHomo sapiensNARNA_seqNA0NA38316783GSE236153hGICcell line

Gene expression profile

       

Scatter diagram of differential expression

Heatmap of unsupervised hierarchical clustering

Heatmap image


Function Enrichment Analysis of differentially expressed genes & Gene Set Enrichment Analysis (GSEA) of all expressed genes