Details for DataSet_659

Sample info of the DataSet

Sample_accession Sample_group Organism Target_gene Data_type sgRNA sgRNA_Number_perVector sgRNA_coordinate PubMed Data_accession Cell_type Sample_Type Notes
GSM7729277caseHomo sapiensPACC1;EPCAM;B2M;KL;RBM3;HINT1ChIP_seq_H3K4me3GGACCTACCGGCTCCGCG,GGGAGTTGGGGGAGTGAGT,GGGTAGGAGAGACTCACGC,GGAGGCAGTCCCGGCTCGC,GAAGACATCCGATCCAGCGG,GACCAGGAACTTCCCCAAGC6chr13:33016293:+,chrX:48574136:+,chr5:131165403:-,chr1:212414837:+,chr2:47369181:-,chr15:44711612:-38000387GSE241460HEK293Tcell line
GSM7729285caseHomo sapiensPACC1;EPCAM;B2M;KL;RBM3;HINT1ChIP_seq_H3K4me3GGACCTACCGGCTCCGCG,GGGAGTTGGGGGAGTGAGT,GGGTAGGAGAGACTCACGC,GGAGGCAGTCCCGGCTCGC,GAAGACATCCGATCCAGCGG,GACCAGGAACTTCCCCAAGC6chr13:33016293:+,chrX:48574136:+,chr5:131165403:-,chr1:212414837:+,chr2:47369181:-,chr15:44711612:-38000387GSE241460HEK293Tcell line
GSM7729281controlHomo sapiensPACC1;EPCAM;B2M;KL;RBM3;HINT1ChIP_seq_H3K4me3GGACCTACCGGCTCCGCG,GGGAGTTGGGGGAGTGAGT,GGGTAGGAGAGACTCACGC,GGAGGCAGTCCCGGCTCGC,GAAGACATCCGATCCAGCGG,GACCAGGAACTTCCCCAAGC6chr13:33016293:+,chrX:48574136:+,chr5:131165403:-,chr1:212414837:+,chr2:47369181:-,chr15:44711612:-38000387GSE241460HEK293Tcell line
GSM7729289controlHomo sapiensPACC1;EPCAM;B2M;KL;RBM3;HINT1ChIP_seq_H3K4me3GGACCTACCGGCTCCGCG,GGGAGTTGGGGGAGTGAGT,GGGTAGGAGAGACTCACGC,GGAGGCAGTCCCGGCTCGC,GAAGACATCCGATCCAGCGG,GACCAGGAACTTCCCCAAGC6chr13:33016293:+,chrX:48574136:+,chr5:131165403:-,chr1:212414837:+,chr2:47369181:-,chr15:44711612:-38000387GSE241460HEK293Tcell line

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Differential binding sites and off-target assessment

  Differential binding sites

  Off-target assessment

  Signal density at the binding sites

GSM7729277
GSM7729285
GSM7729281
GSM7729289