Details for DataSet_660

Sample info of the DataSet

Sample_accession Sample_group Organism Target_gene Data_type sgRNA sgRNA_Number_perVector sgRNA_coordinate PubMed Data_accession Cell_type Sample_Type Notes
GSM7729295caseHomo sapiensPACC1;EPCAM;B2M;KL;RBM3;HINT1Bisulfite_seqGGACCTACCGGCTCCGCG,GGGAGTTGGGGGAGTGAGT,GGGTAGGAGAGACTCACGC,GGAGGCAGTCCCGGCTCGC,GAAGACATCCGATCCAGCGG,GACCAGGAACTTCCCCAAGC6chr13:33016293:+,chrX:48574136:+,chr5:131165403:-,chr1:212414837:+,chr2:47369181:-,chr15:44711612:-38000387GSE241460HEK293Tcell line
GSM7729297caseHomo sapiensPACC1;EPCAM;B2M;KL;RBM3;HINT1Bisulfite_seqGGACCTACCGGCTCCGCG,GGGAGTTGGGGGAGTGAGT,GGGTAGGAGAGACTCACGC,GGAGGCAGTCCCGGCTCGC,GAAGACATCCGATCCAGCGG,GACCAGGAACTTCCCCAAGC6chr13:33016293:+,chrX:48574136:+,chr5:131165403:-,chr1:212414837:+,chr2:47369181:-,chr15:44711612:-38000387GSE241460HEK293Tcell line
GSM7729296controlHomo sapiensPACC1;EPCAM;B2M;KL;RBM3;HINT1Bisulfite_seqGGACCTACCGGCTCCGCG,GGGAGTTGGGGGAGTGAGT,GGGTAGGAGAGACTCACGC,GGAGGCAGTCCCGGCTCGC,GAAGACATCCGATCCAGCGG,GACCAGGAACTTCCCCAAGC6chr13:33016293:+,chrX:48574136:+,chr5:131165403:-,chr1:212414837:+,chr2:47369181:-,chr15:44711612:-38000387GSE241460HEK293Tcell line

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Differentially methylated regions and off-target assessment

  Differentially methylated regions

  Off-target assessment

  Methylation profile

GSM7729295
GSM7729297
GSM7729296