Details for DataSet_661

Sample info of the DataSet

Sample_accession Sample_group Organism Target_gene Data_type sgRNA sgRNA_Number_perVector sgRNA_coordinate PubMed Data_source Cell_type Sample_Type Notes
GSM7749247caseMus musculusMT2_MmRNA_seqCACCAGTGACCCTTATCTGG,GAGGCTTGGAGATCCTTATC,AAGGAACACACCTTTAATCT,TGGAGACAATATAAGGACAT,CAGCTGTGAATGGAAGTCCA,ATTTATTGATGACTTACAGT6chr1:150501384:+,chr18:3053612:-,chr7:25195194:+,chr10:23523941:-,chrX:154779841:+,chr10:60388509:+38381606GSE242121L2C embryosembryos
GSM7749248caseMus musculusMT2_MmRNA_seqCACCAGTGACCCTTATCTGG,GAGGCTTGGAGATCCTTATC,AAGGAACACACCTTTAATCT,TGGAGACAATATAAGGACAT,CAGCTGTGAATGGAAGTCCA,ATTTATTGATGACTTACAGT6chr1:150501384:+,chr18:3053612:-,chr7:25195194:+,chr10:23523941:-,chrX:154779841:+,chr10:60388509:+38381606GSE242121L2C embryosembryos
GSM7749249caseMus musculusMT2_MmRNA_seqCACCAGTGACCCTTATCTGG,GAGGCTTGGAGATCCTTATC,AAGGAACACACCTTTAATCT,TGGAGACAATATAAGGACAT,CAGCTGTGAATGGAAGTCCA,ATTTATTGATGACTTACAGT6chr1:150501384:+,chr18:3053612:-,chr7:25195194:+,chr10:23523941:-,chrX:154779841:+,chr10:60388509:+38381606GSE242121L2C embryosembryos
GSM7749244controlMus musculusNTRNA_seqGCTTAGTTACGCGTGGACGA1NA38381606GSE242121L2C embryosembryos
GSM7749245controlMus musculusNTRNA_seqGCTTAGTTACGCGTGGACGA1NA38381606GSE242121L2C embryosembryos
GSM7749246controlMus musculusNTRNA_seqGCTTAGTTACGCGTGGACGA1NA38381606GSE242121L2C embryosembryos

Gene expression profile

       

Scatter diagram of differential expression

Heatmap of unsupervised hierarchical clustering

Heatmap image


Function Enrichment Analysis of differentially expressed genes & Gene Set Enrichment Analysis (GSEA) of all expressed genes