Sample_accession | Sample_group | Organism | Target_gene | Data_type | sgRNA | sgRNA_Number_perVector | sgRNA_coordinate | PubMed | Data_accession | Cell_type | Sample_Type | Notes |
---|---|---|---|---|---|---|---|---|---|---|---|---|
GSM7749264 | case | Mus musculus | MT2_Mm | ChIP_seq_Cas9 | CACCAGTGACCCTTATCTGG,GAGGCTTGGAGATCCTTATC,AAGGAACACACCTTTAATCT,TGGAGACAATATAAGGACAT,CAGCTGTGAATGGAAGTCCA,ATTTATTGATGACTTACAGT | 6 | chr5:17523931:+,chr8:7755562:+,chr12:19751233:+,chr3:152247435:+,chr7:57811130:-,chr10:32212737:+ | 38381606 | GSE242122 | mESCs | cell line | |
GSM7749265 | case | Mus musculus | MT2_Mm | ChIP_seq_Cas9 | CACCAGTGACCCTTATCTGG,GAGGCTTGGAGATCCTTATC,AAGGAACACACCTTTAATCT,TGGAGACAATATAAGGACAT,CAGCTGTGAATGGAAGTCCA,ATTTATTGATGACTTACAGT | 6 | chr5:17523931:+,chr8:7755562:+,chr12:19751233:+,chr3:152247435:+,chr7:57811130:-,chr10:32212737:+ | 38381606 | GSE242122 | mESCs | cell line | |
GSM7749262 | control | Mus musculus | NA | ChIP_seq_Cas9 | NA | 0 | NA | 38381606 | GSE242122 | mESCs | cell line | |
GSM7749263 | control | Mus musculus | NA | ChIP_seq_Cas9 | NA | 0 | NA | 38381606 | GSE242122 | mESCs | cell line |
Differential binding sites
Off-target assessment
Signal density at the binding sites