Details for DataSet_680

Sample info of the DataSet

Sample_accession Sample_group Organism Target_gene Data_type sgRNA sgRNA_Number_perVector sgRNA_coordinate PubMed Data_source Cell_type Sample_Type Notes
GSM8083700caseHomo sapiensSOX2RNA_seqCCCTGACAGCCCCCGTCACA1chr3:181711903:+38947524GSE255980iPSCcell line
GSM8083701caseHomo sapiensSOX2RNA_seqCCCTGACAGCCCCCGTCACA1chr3:181711903:+38947524GSE255980iPSCcell line
GSM8083702caseHomo sapiensSOX2RNA_seqCCCTGACAGCCCCCGTCACA1chr3:181711903:+38947524GSE255980iPSCcell line
GSM8083703caseHomo sapiensSOX2RNA_seqCCCTGACAGCCCCCGTCACA1chr3:181711903:+38947524GSE255980iPSCcell line
GSM8083704caseHomo sapiensSOX2RNA_seqCCCTGACAGCCCCCGTCACA1chr3:181711903:+38947524GSE255980iPSCcell line
GSM8083705controlHomo sapiensSOX2RNA_seqCCCTGACAGCCCCCGTCACA1chr3:181711903:+38947524GSE255980iPSCcell line
GSM8083706controlHomo sapiensSOX2RNA_seqCCCTGACAGCCCCCGTCACA1chr3:181711903:+38947524GSE255980iPSCcell line
GSM8083707controlHomo sapiensSOX2RNA_seqCCCTGACAGCCCCCGTCACA1chr3:181711903:+38947524GSE255980iPSCcell line
GSM8083708controlHomo sapiensSOX2RNA_seqCCCTGACAGCCCCCGTCACA1chr3:181711903:+38947524GSE255980iPSCcell line
GSM8083709controlHomo sapiensSOX2RNA_seqCCCTGACAGCCCCCGTCACA1chr3:181711903:+38947524GSE255980iPSCcell line

Gene expression profile

       

Scatter diagram of differential expression

Heatmap of unsupervised hierarchical clustering

Heatmap image


Function Enrichment Analysis of differentially expressed genes & Gene Set Enrichment Analysis (GSEA) of all expressed genes