Details for DataSet_682

Sample info of the DataSet

Sample_accession Sample_group Organism Target_gene Data_type sgRNA sgRNA_Number_perVector sgRNA_coordinate PubMed Data_source Cell_type Sample_Type Notes
GSM8083840caseMus musculusPrnpRNA_seqGTCTGCTGATCCGACAACG,CATTTAAGCCAGTCCGGAG,TAGTTGCTGAGCGTCGTCA3chr2:131751873:-,chr2:131751724:+,chr2:131751666:+38935715GSE255987Neuro-2a cellscell line
GSM8083841caseMus musculusPrnpRNA_seqGTCTGCTGATCCGACAACG,CATTTAAGCCAGTCCGGAG,TAGTTGCTGAGCGTCGTCA3chr2:131751873:-,chr2:131751724:+,chr2:131751666:+38935715GSE255987Neuro-2a cellscell line
GSM8083842caseMus musculusPrnpRNA_seqGTCTGCTGATCCGACAACG,CATTTAAGCCAGTCCGGAG,TAGTTGCTGAGCGTCGTCA3chr2:131751873:-,chr2:131751724:+,chr2:131751666:+38935715GSE255987Neuro-2a cellscell line
GSM8083837controlMus musculusNTRNA_seqNT1NA38935715GSE255987Neuro-2a cellscell line
GSM8083838controlMus musculusNTRNA_seqNT1NA38935715GSE255987Neuro-2a cellscell line
GSM8083839controlMus musculusNTRNA_seqNT1NA38935715GSE255987Neuro-2a cellscell line

Gene expression profile

       

Scatter diagram of differential expression

Heatmap of unsupervised hierarchical clustering

Heatmap image


Function Enrichment Analysis of differentially expressed genes & Gene Set Enrichment Analysis (GSEA) of all expressed genes