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Details for
DataSet_687
Sample info of the DataSet
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Sample_accession
Sample_group
Organism
Target_gene
Data_type
sgRNA
sgRNA_Number_perVector
sgRNA_coordinate
PubMed
Data_source
Cell_type
Sample_Type
Notes
Sample_accession
Sample_group
Organism
Target_gene
Data_type
sgRNA
sgRNA_Number_perVector
sgRNA_coordinate
PubMed
Data_source
Cell_type
Sample_Type
Notes
GSM8085156
case
Mus musculus
NID2
RNA_seq
AGCAGCGATAGCGGTGATGG
1
chr14:19801442:-
38959305
GSE256072
KPC CAF B500
cell line
GSM8085155
control
Mus musculus
GFP-1
RNA_seq
GACCAGGATGGGCACCACCC
1
chr3:53484401:+
38959305
GSE256072
KPC CAF B500
cell line
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Gene expression profile
Padj
less than 0.01
less than 0.05
less than 0.1
less than 0.2
less than 0.5
less than 1
abs(LogFC)
greater than 0.585
greater than 1
greater than 1.5
greater than 2
Top DEG
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Scatter diagram of differential expression
Heatmap of unsupervised hierarchical clustering
Function Enrichment Analysis of differentially expressed genes & Gene Set Enrichment Analysis (GSEA) of all expressed genes