Details for DataSet_90
Sample info of the DataSet
| Sample_accession | Sample_group | Organism | Target_gene | Data_type | sgRNA | sgRNA_Number_perVector | sgRNA_coordinate | PubMed | Data_accession | Cell_type | Sample_Type | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GSM2410489 | case | Homo sapiens | HOXA5 | Bisulfite_seq | GGCTGTCGCTGCCGGGCGAG,GTAGCCGTAGCCGTACCTGC,GCACAATTTATGATGAATTA | 3 | chr7:27143265:+,chr7:27143461:+,chr7:27143671:+ | 28695892 | GSE90692 | HEK293T | cell line | |
| GSM2410490 | case | Homo sapiens | HOXA5 | Bisulfite_seq | GGCTGTCGCTGCCGGGCGAG,GTAGCCGTAGCCGTACCTGC,GCACAATTTATGATGAATTA | 3 | chr7:27143265:+,chr7:27143461:+,chr7:27143671:+ | 28695892 | GSE90692 | HEK293T | cell line | |
| GSM2410491 | case | Homo sapiens | HOXA5 | Bisulfite_seq | GGCTGTCGCTGCCGGGCGAG,GTAGCCGTAGCCGTACCTGC,GCACAATTTATGATGAATTA | 3 | chr7:27143265:+,chr7:27143461:+,chr7:27143671:+ | 28695892 | GSE90692 | HEK293T | cell line | |
| GSM2410496 | control | Homo sapiens | NA | Bisulfite_seq | NA | 0 | NA | 28695892 | GSE90692 | HEK293T | cell line | |
| GSM2410497 | control | Homo sapiens | NA | Bisulfite_seq | NA | 0 | NA | 28695892 | GSE90692 | HEK293T | cell line |
JBrowse
Differentially methylated regions and off-target assessment
Differentially methylated regions
Off-target assessment
Methylation profile
