Details for DataSet_91
Sample info of the DataSet
| Sample_accession | Sample_group | Organism | Target_gene | Data_type | sgRNA | sgRNA_Number_perVector | sgRNA_coordinate | PubMed | Data_accession | Cell_type | Sample_Type | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GSM2410492 | case | Homo sapiens | HOXA4 | Bisulfite_seq | GACGTCTGCTGAATCAGTTG,GTGGGGGGGCTCTTTAGGTT,AATCAGTTGCAATCCGTTTT,CCCCCAAGTTGGCAGCATTT,CTCTCCACGCTGTGCAGATT | 5 | NA,NA,NA,NA,NA | 28695892 | GSE90692 | HEK293T | cell line | |
| GSM2410493 | case | Homo sapiens | HOXA4 | Bisulfite_seq | GACGTCTGCTGAATCAGTTG,GTGGGGGGGCTCTTTAGGTT,AATCAGTTGCAATCCGTTTT,CCCCCAAGTTGGCAGCATTT,CTCTCCACGCTGTGCAGATT | 5 | NA,NA,NA,NA,NA | 28695892 | GSE90692 | HEK293T | cell line | |
| GSM2410494 | case | Homo sapiens | HOXA4 | Bisulfite_seq | GACGTCTGCTGAATCAGTTG,GTGGGGGGGCTCTTTAGGTT,AATCAGTTGCAATCCGTTTT,CCCCCAAGTTGGCAGCATTT,CTCTCCACGCTGTGCAGATT | 5 | NA,NA,NA,NA,NA | 28695892 | GSE90692 | HEK293T | cell line | |
| GSM2410496 | control | Homo sapiens | NA | Bisulfite_seq | NA | 0 | NA | 28695892 | GSE90692 | HEK293T | cell line | |
| GSM2410497 | control | Homo sapiens | NA | Bisulfite_seq | NA | 0 | NA | 28695892 | GSE90692 | HEK293T | cell line |
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Differentially methylated regions and off-target assessment
Differentially methylated regions
Off-target assessment
Methylation profile
